BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G04SP1|AL429104
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1138 1714 0.0
>3x_Contig1138
Length = 5524
Score = 1714 bits (864), Expect = 0.0
Identities = 879/882 (99%), Gaps = 2/882 (0%)
Strand = Plus / Plus
Query: 1 gatctacaagattttttgaaactacgactaatggaactacgagatgctaacgtaggacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2129 gatctacaagattttttgaaactacgactaatggaactacgagatgctaacgtaggacga 2188
Query: 61 cagagtaaaaggtgaaaggagcttgttaaattatgtaaaattgctatatatgtacaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2189 cagagtaaaaggtgaaaggagcttgttaaattatgtaaaattgctatatatgtacaggac 2248
Query: 121 ttgtgaaacaagcatgtgttttttttaatggaaaggtcagagactaatatcagatcaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2249 ttgtgaaacaagcatgtgttttttttaatggaaaggtcagagactaatatcagatcaacg 2308
Query: 181 cttaacccaggtaggcatctttcttgcctttctcttaccaggcttctttctttcgacgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2309 cttaacccaggtaggcatctttcttgcctttctcttaccaggcttctttctttcgacgtg 2368
Query: 241 tctgtaatctcttgtcaagacaccggatctatgcaatctagttttcaatagtgggttgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2369 tctgtaatctcttgtcaagacaccggatctatgcaatctagttttcaatagtgggttgaa 2428
Query: 301 agcaaccaatgccttaccgattgcatgcatcaaggcatcggcttgccccgtaataccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2429 agcaaccaatgccttaccgattgcatgcatcaaggcatcggcttgccccgtaataccacc 2488
Query: 361 tccggaaaccattgcaaagacgttatatttgccaacactgtcaatggcttttaatggata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2489 tccggaaaccattgcaaagacgttatatttgccaacactgtcaatggcttttaatggata 2548
Query: 421 cattacggattctctgtccttcattttaacgaagtatatcgtttaattgacggtcgttaa 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2549 cattacggattctctgtccttcattttaacgaagta-atcgtttaattgacggtcgttaa 2607
Query: 481 ctaagatcttaccttcaccacgaaccacatataccttggcagtagaggtctttcttcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 ctaagatcttaccttcaccacgaaccacatataccttggcagtagaggtctttcttcttc 2667
Query: 541 cgatggccaaacttctaccaaactcgtctaattgcttcaaagtatctctttgaggttgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 cgatggccaaacttctaccaaactcgtctaattgcttcaaagtatctctttgaggttgca 2727
Query: 601 acttcgtcttcttatggtatttcgctaaagtgttcgaaatctcatcggtaaccaactgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 acttcgtcttcttatggtatttcgctaaagtgttcgaaatctcatcggtaaccaactgtg 2787
Query: 661 gatcaatagaattcaaacggttcaacatgaacaaaagctgcttatwctgggtagatttca 720
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2788 gatcaatagaattcaaacggttcaacatgaacaaaagctgcttatactgggtagatttca 2847
Query: 721 aacgggacccaccacctattagagcgtactcttgcaaactcaaccaggaaggcctttctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2848 aacgggacccaccacctattagagcgtactcttgcaaactcaaccaggaaggcctttctt 2907
Query: 781 ccacttggacggtaggatatttgatatatttcctcaacaacgcttctaagttatcgatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2908 ccacttggacggtaggatatttgatatatttcctcaacaacgcttctaagttatcgatat 2967
Query: 841 gagcttcgtgatgtgggttggcggagt-aaaagtagacaact 881
||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2968 gagcttcgtgatgtgggttggcggagtaaaaagtagacaact 3009
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6176
Number of Sequences: 1807
Number of extensions: 6176
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)